U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    mag-1 Protein mago nashi homolog [ Caenorhabditis elegans ]

    Gene ID: 173073, updated on 9-Dec-2024

    Summary

    Official Symbol
    mag-1
    Official Full Name
    Protein mago nashi homolog
    Primary source
    WormBase:WBGene00003123
    Locus tag
    CELE_R09B3.5
    See related
    AllianceGenome:WB:WBGene00003123
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in several processes, including feminization of hermaphroditic germ-line; positive regulation of egg-laying behavior; and positive regulation of oogenesis. Predicted to be located in nucleus. Predicted to be part of catalytic step 2 spliceosome and exon-exon junction complex. Is expressed in head; pharynx; and tail. Orthologous to human MAGOHB (mago homolog B, exon junction complex subunit) and MAGOH (mago homolog, exon junction complex subunit). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See mag-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003279.8 (11912005..11912677, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene RRM domain-containing protein Neighboring gene RRM domain-containing protein Neighboring gene NEDD8-conjugating enzyme ubc-12 Neighboring gene Histone deacetylase Neighboring gene Farnesyl pyrophosphate synthase

    Pathways from PubChem

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in RNA splicing  
    involved_in RNA splicing  
    involved_in cell differentiation  
    involved_in feminization of hermaphroditic germ-line PubMed 
    involved_in mRNA processing  
    involved_in mRNA transport  
    involved_in nuclear mRNA surveillance PubMed 
    involved_in oogenesis  
    involved_in positive regulation of egg-laying behavior PubMed 
    involved_in positive regulation of oogenesis PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome  
    part_of exon-exon junction complex  
    part_of exon-exon junction complex  
    located_in nucleus  

    General protein information

    Preferred Names
    Protein mago nashi homolog
    NP_493025.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11912005..11912677 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060624.9 → NP_493025.1  Protein mago nashi homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493025.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A023T4K3, O16104, O45714, P49029
      Conserved Domains (1) summary
      cd11295
      Location:10 → 152
      Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
    External link. Please review our privacy policy.