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    hpo-36 Fibronectin type-III domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188979, updated on 9-Dec-2024

    Summary

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    Official Symbol
    hpo-36
    Official Full Name
    Fibronectin type-III domain-containing protein
    Primary source
    WormBase:WBGene00020855
    Locus tag
    CELE_T27C4.2
    See related
    AllianceGenome:WB:WBGene00020855
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See hpo-36 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    14
    Sequence:
    Chromosome: V; NC_003283.11 (3727253..3739402, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Seven TM Receptor Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Myotubularin-related protein 9 Neighboring gene CTLH domain-containing protein;WD_REPEATS_REGION domain-containing protein Neighboring gene Serine/threonine-protein kinase chk-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fibronectin type-III domain-containing protein
    NP_001309614.1
    • Confirmed by transcript evidence
    NP_001309615.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3727253..3739402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001322543.3 → NP_001309614.1  Fibronectin type-III domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCT7
      Conserved Domains (2) summary
      pfam12718
      Location:491 → 602
      Tropomyosin_1; Tropomyosin like
      cl09111
      Location:547 → 605
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

    2. NM_001322544.3 → NP_001309615.1  Fibronectin type-III domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCZ0
      Conserved Domains (2) summary
      pfam12718
      Location:398 → 509
      Tropomyosin_1; Tropomyosin like
      cl09111
      Location:454 → 512
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    Nucleotide Protein
    Heading Accession and Version

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