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    K08D9.4 AB hydrolase-1 domain-containing protein;DUF2090 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187147, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K08D9.4
    Official Full Name
    AB hydrolase-1 domain-containing protein;DUF2090 domain-containing protein
    Primary source
    WormBase:WBGene00019525
    Locus tag
    CELE_K08D9.4
    See related
    AllianceGenome:WB:WBGene00019525
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K08D9.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (3198544..3200423, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene AB hydrolase-1 domain-containing protein Neighboring gene EF-hand domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Anterior pharynx in excess protein 1;Delta-like protein;EGF-like domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    AB hydrolase-1 domain-containing protein;DUF2090 domain-containing protein
    NP_001305193.1
    • Confirmed by transcript evidence
    NP_001305194.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3198544..3200423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001318264.3 → NP_001305193.1  AB hydrolase-1 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0S4XR75
      Conserved Domains (2) summary
      pfam06342
      Location:15 → 310
      DUF1057; Alpha/beta hydrolase of unknown function (DUF1057)
      COG0596
      Location:46 → 258
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

    2. NM_001318265.2 → NP_001305194.1  DUF2090 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0S4XRB1
      Conserved Domains (1) summary
      cl21494
      Location:1 → 124
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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