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    B0495.5 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 174243, updated on 9-Dec-2024

    Summary

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    Official Symbol
    B0495.5
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00015204
    Locus tag
    CELE_B0495.5
    See related
    AllianceGenome:WB:WBGene00015204
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in carbohydrate metabolic process. Orthologous to human SPATA20 (spermatogenesis associated 20). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See B0495.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (7695935..7698494, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Na(+)/H(+) exchanger protein 2 Neighboring gene ncRNA Neighboring gene Protein moa-2 Neighboring gene Cyclin-dependent kinase 11.1 Neighboring gene Putative endoplasmic reticulum metallopeptidase 1-A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_495615.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7695935..7698494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063214.8 → NP_495615.2  Uncharacterized protein CELE_B0495.5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495615.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09214
      Conserved Domains (3) summary
      COG1331
      Location:13 → 729
      YyaL; Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only]
      pfam03190
      Location:18 → 180
      Thioredox_DsbH; Protein of unknown function, DUF255
      cl04955
      Location:466 → 566
      LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09214.2

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