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    egl-20 Protein Wnt [ Caenorhabditis elegans ]

    Gene ID: 177821, updated on 9-Dec-2024

    Summary

    Official Symbol
    egl-20
    Official Full Name
    Protein Wnt
    Primary source
    WormBase:WBGene00001188
    Locus tag
    CELE_W08D2.1
    See related
    AllianceGenome:WB:WBGene00001188
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables receptor tyrosine kinase binding activity. Involved in several processes, including neuron migration; positive regulation of axon guidance; and regulation of cell migration. Located in extracellular space. Is expressed in several structures, including hypodermis; muscle cell; neuroblasts; rectal epithelial cell; and somatic nervous system. Orthologous to human WNT16 (Wnt family member 16). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See egl-20 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    11
    Sequence:
    Chromosome: IV; NC_003282.8 (9812418..9815526, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Delta(6)-fatty-acid desaturase fat-3;Fatty acid desaturase domain-containing protein Neighboring gene RGS domain-containing protein Neighboring gene ncRNA Neighboring gene Cation-transporting ATPase 13A3;Cation-transporting P-type ATPase N-terminal domain-containing protein;putative cation-transporting ATPase W08D2.5 Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables cytokine activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables frizzled binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables frizzled binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables receptor ligand activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables receptor tyrosine kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Wnt signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in asymmetric cell division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in canonical Wnt signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in canonical Wnt signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell fate commitment IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in establishment of mitotic spindle orientation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in generation of neurons IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in interneuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in left/right axis specification IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in mitochondrial unfolded protein response IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in motor neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in motor neuron migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of motor neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in neuroblast migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in neuroblast migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of anterior/posterior axon guidance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of distal tip cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of motor neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of sensory neuron axon guidance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in programmed cell death involved in cell development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in programmed cell death involved in cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of vulval development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in sensory neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    General protein information

    Preferred Names
    Protein Wnt
    NP_001366963.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9812418..9815526 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001380420.2NP_001366963.1  Protein Wnt [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EG05
      Conserved Domains (1) summary
      cl38924
      Location:70393
      Wnt; Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family