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    Cpxcr1 CPX chromosome region, candidate 1 [ Mus musculus (house mouse) ]

    Gene ID: 382239, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cpxcr1provided by MGI
    Official Full Name
    CPX chromosome region, candidate 1provided by MGI
    Primary source
    MGI:MGI:2685989
    See related
    Ensembl:ENSMUSG00000072995 AllianceGenome:MGI:2685989
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1143
    Summary
    Orthologous to human CPXCR1 (CPX chromosome region candidate 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 3.2) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cpxcr1 in Genome Data Viewer
    Location:
    X E1; X 49.48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (115358641..115388480)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (116448944..116478783)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene histone H2A-Bbd type 2/3-like Neighboring gene STARR-seq mESC enhancer starr_47808 Neighboring gene predicted gene, 24624 Neighboring gene STARR-seq mESC enhancer starr_47809 Neighboring gene STARR-seq mESC enhancer starr_47810 Neighboring gene STARR-seq mESC enhancer starr_47812 Neighboring gene predicted gene, 52471 Neighboring gene H2A.B variant histone 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    CPX chromosomal region candidate gene 1 protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033471.3NP_001028643.2  CPX chromosomal region candidate gene 1 protein homolog

      See identical proteins and their annotated locations for NP_001028643.2

      Status: VALIDATED

      Source sequence(s)
      AK133001, AV270501, BX005471
      Consensus CDS
      CCDS30367.1
      UniProtKB/Swiss-Prot
      A2BEE6, B2RW29, Q3V0P1
      Related
      ENSMUSP00000098827.2, ENSMUST00000101269.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      115358641..115388480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)