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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001202560.3 → NP_001189489.1 18S rRNA (guanine-N(7))-methyltransferase isoform 1
See identical proteins and their annotated locations for NP_001189489.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AA099700, AA508840, AF412034, BQ927478
- Consensus CDS
-
CCDS56490.1
- UniProtKB/TrEMBL
-
Q75ME3
- Conserved Domains (1) summary
-
- PRK10258
Location:34 → 130
- PRK10258; biotin biosynthesis protein BioC; Provisional
-
NM_017528.5 → NP_059998.2 18S rRNA (guanine-N(7))-methyltransferase isoform 2
See identical proteins and their annotated locations for NP_059998.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 3' coding region but maintains the reading frame, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AA508840, AF412034
- Consensus CDS
-
CCDS5557.1
- UniProtKB/Swiss-Prot
- A8K501, C9K060, O43709, Q96P12, Q9BQ58, Q9HBP9
- UniProtKB/TrEMBL
-
Q75ME3
- Related
- ENSP00000265758.3, ENST00000265758.7
- Conserved Domains (2) summary
-
- pfam12589
Location:204 → 279
- WBS_methylT; Methyltransferase involved in Williams-Beuren syndrome
- pfam13649
Location:58 → 156
- Methyltransf_25; Methyltransferase domain
RNA
-
NR_037776.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA508840, BM794274, BP280183, BQ961799
-
NR_045512.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA508840, BG108222, BP280183, BQ930813, DB276687
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
73683597..73698212
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006715847.2 → XP_006715910.1 18S rRNA (guanine-N(7))-methyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q75ME3
- Conserved Domains (3) summary
-
- pfam08241
Location:81 → 184
- Methyltransf_11; Methyltransferase domain
- pfam12589
Location:227 → 302
- WBS_methylT; Methyltransferase involved in Williams-Beuren syndrome
- cl17173
Location:38 → 117
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
XM_011515778.2 → XP_011514080.1 18S rRNA (guanine-N(7))-methyltransferase isoform X2
- Conserved Domains (2) summary
-
- pfam08241
Location:81 → 184
- Methyltransf_11; Methyltransferase domain
- cl17173
Location:38 → 117
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
XM_011515779.3 → XP_011514081.1 18S rRNA (guanine-N(7))-methyltransferase isoform X3
- Conserved Domains (1) summary
-
- pfam08241
Location:58 → 161
- Methyltransf_11; Methyltransferase domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
74884512..74899128
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054357199.1 → XP_054213174.1 18S rRNA (guanine-N(7))-methyltransferase isoform X1
- UniProtKB/TrEMBL
-
Q75ME3
-
XM_054357200.1 → XP_054213175.1 18S rRNA (guanine-N(7))-methyltransferase isoform X2
-
XM_054357201.1 → XP_054213176.1 18S rRNA (guanine-N(7))-methyltransferase isoform X3