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    Angptl1 angiopoietin-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 72713, updated on 9-Dec-2024

    Summary

    Official Symbol
    Angptl1provided by MGI
    Official Full Name
    angiopoietin-like 1provided by MGI
    Primary source
    MGI:MGI:1919963
    See related
    Ensembl:ENSMUSG00000033544 AllianceGenome:MGI:1919963
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ANG3; ANGY; ARP1; ANGPT3; 2810039D03Rik
    Summary
    Enables signaling receptor binding activity. Acts upstream of or within cell surface receptor protein tyrosine kinase signaling pathway. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including alimentary system; heart; intraembryonic coelom; limb mesenchyme; and skeleton. Orthologous to human ANGPTL1 (angiopoietin like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in limb E14.5 (RPKM 33.4), CNS E14 (RPKM 3.0) and 3 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Angptl1 in Genome Data Viewer
    Location:
    1 G3; 1 67.75 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (156666495..156688648)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (156839023..156861078)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr1:158682524-158682825 Neighboring gene predicted gene, 39683 Neighboring gene PCNA-associated factor pseudogene Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158834070-158834253 Neighboring gene STARR-positive B cell enhancer ABC_E2572 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158863932-158864133 Neighboring gene RIKEN cDNA 4930439D14 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158868943-158869130 Neighboring gene STARR-positive B cell enhancer ABC_E9487 Neighboring gene STARR-seq mESC enhancer starr_02758 Neighboring gene STARR-positive B cell enhancer ABC_E5828 Neighboring gene predicted gene, 39685

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC100363

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables signaling receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in collagen-containing extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    angiopoietin-related protein 1
    Names
    angiopoietin-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028333.3NP_082609.2  angiopoietin-related protein 1 precursor

      See identical proteins and their annotated locations for NP_082609.2

      Status: VALIDATED

      Source sequence(s)
      AC138109
      Consensus CDS
      CCDS15397.1
      UniProtKB/Swiss-Prot
      Q3UQL1, Q640P2, Q9CZ81
      Related
      ENSMUSP00000027885.8, ENSMUST00000027885.8
      Conserved Domains (2) summary
      cd00087
      Location:274489
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
      cl23720
      Location:91207
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      156666495..156688648
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)