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    yfdK putative tail fiber assembly protein YfdK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948822, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfdK
    Official Full Name
    putative tail fiber assembly protein YfdK
    Primary source
    ECOCYC:G7223
    Locus tag
    b2354
    See related
    ASAP:ABE-0007770
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2348
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    Genomic context

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    Sequence:
    NC_000913.3 (2471077..2471517, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene bactoprenol glucosyl transferase Neighboring gene serotype-specific glucosyl transferase YfdI Neighboring gene toxic protein YodE Neighboring gene pseudo Neighboring gene pseudo Neighboring gene putative methyltransferase YfdM Neighboring gene uncharacterized protein YfdN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cryptic prophages help bacteria cope with adverse environments. Wang X, et al. Nat Commun, 2010. PMID 21266997, Free PMC Article
    2. Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. Panis G, et al. J Biol Chem, 2007 Jul 27. PMID 17545146
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative tail fiber assembly protein YfdK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2471077..2471517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416855.1 putative tail fiber assembly protein YfdK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416855.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377K276
      Conserved Domains (1) summary
      pfam02413
      Location:7 → 142
      Caudo_TAP; Caudovirales tail fibre assembly protein, lambda gpK
    Nucleotide Protein
    Heading Accession and Version

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