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    gspF Type II secretion system protein GspF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947829, updated on 3-Dec-2024

    Summary

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    Official Symbol
    gspF
    Official Full Name
    Type II secretion system protein GspF
    Primary source
    ECOCYC:G7705
    Locus tag
    b3327
    See related
    ASAP:ABE-0010883
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3314; hofF; hopF
    Summary
    A divergon is a regulon comprised of two adjacent divergent operons or genes. [More information is available at EcoGene: EG12885]. In Escherichia coli, gspF is a member of an operon of genes (gspC-O) which are not normally expressed but are homologous to those encoding the secreton, or type II secretion machinery in Klebsiella oxytoca and Aeromonase hydrophila, among others . [More information is available at EcoCyc: G7705].
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    Genomic context

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    Sequence:
    NC_000913.3 (3459817..3461013)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Type II secretion system protein GspA Neighboring gene Type II secretion system protein GspC Neighboring gene Type II secretion system protein GspD Neighboring gene Type II secretion system protein GspE Neighboring gene Type II secretion system protein GspG Neighboring gene Type II secretion system protein GspH Neighboring gene Type II secretion system protein GspI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the hopG gene, a component of Escherichia coli K-12 type II export system, and its conservation among different pathogenic Escherichia coli and Shigella isolates. Stojiljkovic I, et al. J Bacteriol, 1995 Apr. PMID 7896718, Free PMC Article
    2. Type IV-like pili formed by the type II secreton: specificity, composition, bundling, polar localization, and surface presentation of peptides. Vignon G, et al. J Bacteriol, 2003 Jun. PMID 12754241, Free PMC Article
    3. Protein secretion in Escherichia coli K-12: dead or alive? Pugsley AP, et al. Cell Mol Life Sci, 1998 Apr. PMID 9614971, Free PMC Article
    4. Involvement of the twin-arginine translocation system in protein secretion via the type II pathway. Voulhoux R, et al. EMBO J, 2001 Dec 3. PMID 11726509, Free PMC Article
    5. The cryptic general secretory pathway (gsp) operon of Escherichia coli K-12 encodes functional proteins. Francetic O, et al. J Bacteriol, 1996 Jun. PMID 8655552, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein secretion by the type II secretion system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein secretion by the type II secretion system IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of type II protein secretion system complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Type II secretion system protein GspF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3459817..3461013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417786.1 Type II secretion system protein GspF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417786.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6L7C5W4
      Conserved Domains (1) summary
      TIGR02120
      Location:3 → 397
      GspF; type II secretion system protein F
    Nucleotide Protein
    Heading Accession and Version

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