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    Cmpk2 cytidine/uridine monophosphate kinase 2 [ Mus musculus (house mouse) ]

    Gene ID: 22169, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cmpk2provided by MGI
    Official Full Name
    cytidine/uridine monophosphate kinase 2provided by MGI
    Primary source
    MGI:MGI:99830
    See related
    Ensembl:ENSMUSG00000020638 AllianceGenome:MGI:99830
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TDKI; Tyki; 1200004E04Rik
    Summary
    Predicted to enable nucleobase-containing compound kinase activity. Acts upstream of or within cellular response to lipopolysaccharide. Predicted to be located in nucleoplasm. Predicted to be active in mitochondrion. Is expressed in several structures, including adrenal gland; genitourinary system; gut gland; liver; and nervous system. Orthologous to human CMPK2 (cytidine/uridine monophosphate kinase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in small intestine adult (RPKM 11.2), adrenal adult (RPKM 9.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Cmpk2 in Genome Data Viewer
    Location:
    12 A2; 12 9.69 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (26519121..26529836)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (26469117..26479837)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene ring finger protein 144A Neighboring gene microRNA 6538 Neighboring gene radical S-adenosyl methionine domain containing 2 Neighboring gene predicted gene, 46344 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:27209914-27210115 Neighboring gene RIKEN cDNA 1700020D12 gene Neighboring gene STARR-seq mESC enhancer starr_31789 Neighboring gene STARR-seq mESC enhancer starr_31790

    Genomic regions, transcripts, and products

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables (d)CMP kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables (d)CMP kinase activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables CMP kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables UMP kinase activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables UMP/dUMP kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables dCMP kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleoside diphosphate kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleoside diphosphate kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables nucleoside diphosphate kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables thymidylate kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thymidylate kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables thymidylate kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to lipopolysaccharide IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in dTDP biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dTDP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in dTDP biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in dTTP biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dUDP biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dUDP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in dUDP biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in nucleoside monophosphate phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    UMP-CMP kinase 2, mitochondrial
    Names
    cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
    nucleoside-diphosphate kinase
    thymidylate kinase LPS-inducible member
    thymidylate kinase homologue
    NP_065582.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020557.4NP_065582.3  UMP-CMP kinase 2, mitochondrial precursor

      See identical proteins and their annotated locations for NP_065582.3

      Status: VALIDATED

      Source sequence(s)
      BC057565, CA528639
      Consensus CDS
      CCDS49039.1
      UniProtKB/Swiss-Prot
      Q3U5Q7, Q3UCI7, Q5XKG5, Q62316, Q6PFG7, Q9DC34
      Related
      ENSMUSP00000020969.4, ENSMUST00000020969.5
      Conserved Domains (2) summary
      COG0125
      Location:248443
      Tmk; Thymidylate kinase [Nucleotide transport and metabolism]
      cl17190
      Location:255444
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      26519121..26529836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003950046.2 RNA Sequence

    2. XR_381188.5 RNA Sequence