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    Wwp2 WW domain containing E3 ubiquitin protein ligase 2 [ Mus musculus (house mouse) ]

    Gene ID: 66894, updated on 9-Dec-2024

    Summary

    Official Symbol
    Wwp2provided by MGI
    Official Full Name
    WW domain containing E3 ubiquitin protein ligase 2provided by MGI
    Primary source
    MGI:MGI:1914144
    See related
    Ensembl:ENSMUSG00000031930 AllianceGenome:MGI:1914144
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AIP2; 1300010O06Rik
    Summary
    Enables RNA polymerase II-specific DNA-binding transcription factor binding activity and ubiquitin protein ligase activity. Involved in proteasome-mediated ubiquitin-dependent protein catabolic process; protein K63-linked ubiquitination; and regulation of DNA-templated transcription. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is expressed in several structures, including heart valve; respiratory system; sensory organ; skeleton; and tarsus. Orthologous to human WWP2 (WW domain containing E3 ubiquitin protein ligase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 69.1), testis adult (RPKM 34.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Wwp2 in Genome Data Viewer
    Location:
    8 D3; 8 54.15 cM
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (108162966..108285922)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (107436334..107559290)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_22601 Neighboring gene NAD(P)H dehydrogenase, quinone 1 Neighboring gene STARR-positive B cell enhancer ABC_E8262 Neighboring gene STARR-positive B cell enhancer ABC_E1107 Neighboring gene NIN1/RPN12 binding protein 1 homolog Neighboring gene STARR-seq mESC enhancer starr_22606 Neighboring gene ribosomal protein S26, pseudogene 1 Neighboring gene predicted gene, 39241 Neighboring gene STARR-seq mESC enhancer starr_22610 Neighboring gene predicted gene, 51547 Neighboring gene STARR-positive B cell enhancer ABC_E11397 Neighboring gene microRNA 140 Neighboring gene STARR-seq mESC enhancer starr_22613 Neighboring gene STARR-seq mESC enhancer starr_22614 Neighboring gene STARR-seq mESC enhancer starr_22615 Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 Neighboring gene STARR-seq mESC enhancer starr_22616 Neighboring gene predicted gene 8940

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in extracellular transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in extracellular transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein K63-linked ubiquitination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein autoubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein autoubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein ubiquitination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of membrane potential ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of monoatomic ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of monoatomic ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of potassium ion transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of transcription by RNA polymerase II IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    NEDD4-like E3 ubiquitin-protein ligase WWP2
    Names
    HECT-type E3 ubiquitin transferase WWP2
    WW domain-containing protein 2
    WW domain-containing protein 4
    NP_080106.1
    XP_006531362.1
    XP_006531364.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025830.4NP_080106.1  NEDD4-like E3 ubiquitin-protein ligase WWP2

      See identical proteins and their annotated locations for NP_080106.1

      Status: VALIDATED

      Source sequence(s)
      AC132126
      Consensus CDS
      CCDS40467.1
      UniProtKB/Swiss-Prot
      Q8BTG4, Q923F6, Q9DBH0
      UniProtKB/TrEMBL
      A0A1D5RM92, I3RSH5
      Related
      ENSMUSP00000132224.2, ENSMUST00000166615.3
      Conserved Domains (5) summary
      cd04021
      Location:17142
      C2_E3_ubiquitin_ligase; C2 domain present in E3 ubiquitin ligase
      PRK07003
      Location:149299
      PRK07003; DNA polymerase III subunit gamma/tau
      cd00078
      Location:516868
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
      cd00201
      Location:447477
      WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
      pfam00397
      Location:332361
      WW; WW domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      108162966..108285922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531299.5XP_006531362.1  NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1

      See identical proteins and their annotated locations for XP_006531362.1

      UniProtKB/Swiss-Prot
      Q8BTG4, Q923F6, Q9DBH0
      UniProtKB/TrEMBL
      A0A1D5RM92, I3RSH5
      Related
      ENSMUSP00000148679.2, ENSMUST00000212205.2
      Conserved Domains (5) summary
      cd04021
      Location:17142
      C2_E3_ubiquitin_ligase; C2 domain present in E3 ubiquitin ligase
      PRK07003
      Location:149299
      PRK07003; DNA polymerase III subunit gamma/tau
      cd00078
      Location:516868
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
      cd00201
      Location:447477
      WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
      pfam00397
      Location:332361
      WW; WW domain
    2. XM_006531301.2XP_006531364.1  NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2

      See identical proteins and their annotated locations for XP_006531364.1

      UniProtKB/TrEMBL
      Q3TXI7
      Related
      ENSMUSP00000148813.2, ENSMUST00000212543.2
      Conserved Domains (2) summary
      cd00078
      Location:77429
      HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
      cd00201
      Location:838
      WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...

    RNA

    1. XR_003947327.1 RNA Sequence