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    Tmem202 transmembrane protein 202 [ Mus musculus (house mouse) ]

    Gene ID: 73893, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem202provided by MGI
    Official Full Name
    transmembrane protein 202provided by MGI
    Primary source
    MGI:MGI:1921143
    See related
    Ensembl:ENSMUSG00000049526 AllianceGenome:MGI:1921143
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930425N13Rik
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human TMEM202 (transmembrane protein 202). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 24.3), colon adult (RPKM 3.4) and 3 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tmem202 in Genome Data Viewer
    Location:
    9 B; 9 32.02 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (59425954..59447134, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (59518671..59539674, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene ariadne RBR E3 ubiquitin protein ligase 1 Neighboring gene STARR-positive B cell enhancer mm9_chr9:59334521-59334822 Neighboring gene predicted gene, 20199 Neighboring gene predicted gene, 33180 Neighboring gene hexosaminidase A Neighboring gene predicted gene, 51709 Neighboring gene CUGBP, Elav-like family member 6 Neighboring gene STARR-positive B cell enhancer ABC_E8292 Neighboring gene poly (ADP-ribose) polymerase family, member 6 Neighboring gene predicted gene, 51708

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428952.1NP_001415881.1  transmembrane protein 202 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC123817
    2. NM_178388.3NP_848475.1  transmembrane protein 202 isoform 1

      See identical proteins and their annotated locations for NP_848475.1

      Status: VALIDATED

      Source sequence(s)
      AC123817
      Consensus CDS
      CCDS23249.1
      UniProtKB/Swiss-Prot
      Q80W35
      UniProtKB/TrEMBL
      B9EHM8
      Related
      ENSMUSP00000053782.7, ENSMUST00000055345.9

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      59425954..59447134 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017313629.2XP_017169118.1  transmembrane protein 202 isoform X1

      Related
      ENSMUST00000214580.2
    2. XM_036155344.1XP_036011237.1  transmembrane protein 202 isoform X1