NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286809.1 → NP_001273738.1 calcium/calmodulin-dependent protein kinase type II subunit alpha isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a significant portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 2. The resulting isoform (3) is shorter and has a distinct N-terminus, compared to isoform 2.
- Source sequence(s)
-
AK083245, AW490258, BB659027, BC031745, BY713276
- Consensus CDS
-
CCDS70898.1
- UniProtKB/TrEMBL
-
F8WHB5
- Related
- ENSMUSP00000048325.7, ENSMUST00000039904.7
- Conserved Domains (1) summary
-
- pfam08332
Location:57 → 184
- CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
-
NM_001403309.1 → NP_001390238.1 calcium/calmodulin-dependent protein kinase type II subunit alpha isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC124431
- UniProtKB/TrEMBL
- F8WIS9, Q80TN1
- Related
- ENSMUSP00000025519.5, ENSMUST00000025519.11
-
NM_001403312.1 → NP_001390241.1 calcium/calmodulin-dependent protein kinase type II subunit alpha isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC124431
- UniProtKB/TrEMBL
-
Q80TN1
-
NM_009792.3 → NP_033922.1 calcium/calmodulin-dependent protein kinase type II subunit alpha isoform 1
See identical proteins and their annotated locations for NP_033922.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) differs in the 5' UTR, lacks a significant portion of the 5' coding region, initiates translation at an alternate start codon, and has an additional internal exon in the coding region, compared to variant 2. The resulting isoform (1) is shorter and has a distinct N-terminus and an additional internal segment, compared to isoform 2.
- Source sequence(s)
-
AC124431
- Consensus CDS
-
CCDS29277.1
- UniProtKB/Swiss-Prot
-
P11798
- Related
- ENSMUSP00000110950.3, ENSMUST00000115295.9
- Conserved Domains (1) summary
-
- pfam08332
Location:68 → 195
- CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
-
NM_177407.4 → NP_803126.1 calcium/calmodulin-dependent protein kinase type II subunit alpha isoform 2
See identical proteins and their annotated locations for NP_803126.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) is the longest transcript and encodes the longest isoform (2).
- Source sequence(s)
-
AK083245, AW490258, BC031745
- Consensus CDS
-
CCDS29276.1
- UniProtKB/Swiss-Prot
- P11798, Q61284, Q6ZWN4
- UniProtKB/TrEMBL
-
Q80TN1
- Related
- ENSMUSP00000099952.4, ENSMUST00000102888.10
- Conserved Domains (2) summary
-
- cd14086
Location:11 → 302
- STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
- pfam08332
Location:346 → 473
- CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000084.7 Reference GRCm39 C57BL/6J
- Range
-
61058704..61121224
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)