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    RPL43B ribosomal 60S subunit protein L43B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853557, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RPL43B
    Official Full Name
    ribosomal 60S subunit protein L43B
    Primary source
    SGD:S000003855
    Locus tag
    YJR094W-A
    See related
    AllianceGenome:SGD:S000003855; FungiDB:YJR094W-A; VEuPathDB:YJR094W-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be involved in cytoplasmic translation. Part of cytosolic large ribosomal subunit. Orthologous to several human genes including RPL37A (ribosomal protein L37a). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See RPL43B in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Sequence:
    Chromosome: X; NC_001142.9 (608305..608858)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene transcription factor IME1 Neighboring gene ncRNA Neighboring gene Sfc1p Neighboring gene aldo-keto reductase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001142.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of the zinc finger motif and of the residues at the amino terminus in the function of yeast ribosomal protein YL37a. Dresios J, et al. J Mol Biol, 2002 Feb 22. PMID 11866512
    2. The contribution of a zinc finger motif to the function of yeast ribosomal protein YL37a. Rivlin AA, et al. J Mol Biol, 1999 Dec 10. PMID 10588896
    3. The dedicated chaperones of eL43, Puf6 and Loc1 can also bind RPL43 mRNA and regulate the production of this ribosomal protein. Yueh LY, et al. J Biochem, 2022 Jan 7. PMID 34661244
    4. Analysis of cell cycle parameters during the transition from unhindered growth to ribosomal and translational stress conditions. Shamsuzzaman M, et al. PLoS One, 2017. PMID 29028845, Free PMC Article
    5. Regulation of LRG1 expression by RNA-binding protein Puf5 in the budding yeast cell wall integrity pathway. Viet NTM, et al. Genes Cells, 2018 Dec. PMID 30281869

    See all (85) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IC
    Inferred by Curator
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal 60S subunit protein L43B
    NP_012628.3
    • Ribosomal 60S subunit protein L43B; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43B has a paralog, RPL43A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      608305..608858
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181752.3 → NP_012628.3  TPA: ribosomal 60S subunit protein L43B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012628.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VWR3, P0CX25, P0CX26, P49631
      UniProtKB/TrEMBL
      A6ZQ50, B3LLA2, C8ZBP1, G2WH97
      Conserved Domains (1) summary
      PTZ00255
      Location:1 → 88
      PTZ00255; 60S ribosomal protein L37a; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CX25.1
    P0CX26.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials