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    Casp16 caspase 16, apoptosis-related cysteine peptidase [ Mus musculus (house mouse) ]

    Gene ID: 381070, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Casp16provided by MGI
    Official Full Name
    caspase 16, apoptosis-related cysteine peptidaseprovided by MGI
    Primary source
    MGI:MGI:3646305
    See related
    Ensembl:ENSMUSG00000067882 AllianceGenome:MGI:3646305
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5146; EG381070; Casp16-ps
    Summary
    Orthologous to human CASP16P (caspase 16, pseudogene). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Casp16 in Genome Data Viewer
    Location:
    17 A3.3; 17 11.66 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (23770054..23774304, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23551080..23555330, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 6330415G19 gene Neighboring gene STARR-positive B cell enhancer ABC_E1934 Neighboring gene nuclear encoded tRNA arginine 2 (anticodon CCT) Neighboring gene nuclear encoded tRNA arginine 2 (anticodon CCG) Neighboring gene zinc finger protein 213 Neighboring gene STARR-positive B cell enhancer ABC_E9944 Neighboring gene zinc finger protein 13 Neighboring gene STARR-seq mESC enhancer starr_42052

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genomic analysis of rat proteases and protease inhibitors. Puente XS, et al. Genome Res, 2004 Apr. PMID 15060002, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • Putative caspase-16
    • caspase 16, apoptosis-related cysteine peptidase, pseudogene
    • caspase-16 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_042238.1 

      Range
      101..4351
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      23770054..23774304 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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