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    Krtap7-1 keratin associated protein 7-1 [ Mus musculus (house mouse) ]

    Gene ID: 71363, updated on 9-Dec-2024

    Summary

    Official Symbol
    Krtap7-1provided by MGI
    Official Full Name
    keratin associated protein 7-1provided by MGI
    Primary source
    MGI:MGI:1918613
    See related
    Ensembl:ENSMUSG00000056706 AllianceGenome:MGI:1918613
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5430433J05Rik
    Summary
    Predicted to be located in intermediate filament. Orthologous to human KRTAP7-1 (keratin associated protein 7-1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Krtap7-1 in Genome Data Viewer
    Location:
    16 C3.3; 16 51.42 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (89304591..89305211, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (89507703..89508323, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23655 Neighboring gene keratin associated protein 8-1 Neighboring gene STARR-seq mESC enhancer starr_41421 Neighboring gene keratin associated protein 11-1 Neighboring gene STARR-seq mESC enhancer starr_41422 Neighboring gene cyclin G1 pseudogene

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  
    located_in intermediate filament  

    General protein information

    Preferred Names
    keratin-associated protein 7-1
    Names
    high glycine-tyrosine keratin-associated protein 7.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027771.1NP_082047.1  keratin-associated protein 7-1

      See identical proteins and their annotated locations for NP_082047.1

      Status: VALIDATED

      Source sequence(s)
      AK017387, CB320982
      Consensus CDS
      CCDS49902.1
      UniProtKB/Swiss-Prot
      Q9D3I6
      Related
      ENSMUSP00000054720.3, ENSMUST00000056118.4
      Conserved Domains (1) summary
      pfam15034
      Location:184
      KRTAP7; KRTAP type 7 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      89304591..89305211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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