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    Oog1 oogenesin 1 [ Mus musculus (house mouse) ]

    Gene ID: 193322, updated on 9-Dec-2024

    Summary

    Official Symbol
    Oog1provided by MGI
    Official Full Name
    oogenesin 1provided by MGI
    Primary source
    MGI:MGI:2679150
    See related
    Ensembl:ENSMUSG00000096576 AllianceGenome:MGI:2679150
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Oog; c-1
    Summary
    Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Acts upstream of or within oocyte development. Located in cytoplasm and nucleus. Is expressed in blastocyst; early embryo; and ovary. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward ovary adult (RPKM 1.4) See more
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    Genomic context

    See Oog1 in Genome Data Viewer
    Location:
    12 D2; 12 41.84 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (87649435..87655615)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (87602665..87608845)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene STARR-seq mESC enhancer starr_32892 Neighboring gene STARR-seq mESC enhancer starr_32893 Neighboring gene eukaryotic translation initiation factor 1A domain containing 6 Neighboring gene STARR-seq mESC enhancer starr_32894 Neighboring gene GLE1 RNA export mediator pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ubiquitin-like ligase-substrate adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178657.5NP_848772.3  oogenesin-1

      Status: VALIDATED

      Source sequence(s)
      AB050008, AK143386, CF915726, DV647701
      Consensus CDS
      CCDS49123.1
      UniProtKB/Swiss-Prot
      E9Q5G7, Q810D9
      UniProtKB/TrEMBL
      Q3UX09, Q5XG66
      Related
      ENSMUSP00000093165.5, ENSMUST00000095509.6

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      87649435..87655615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006515619.2XP_006515682.1  oogenesin-1 isoform X1

      UniProtKB/TrEMBL
      Q5XG66