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    rpl-9 Large ribosomal subunit protein uL6 [ Caenorhabditis elegans ]

    Gene ID: 176071, updated on 9-Dec-2024

    Summary

    Official Symbol
    rpl-9
    Official Full Name
    Large ribosomal subunit protein uL6
    Primary source
    WormBase:WBGene00004420
    Locus tag
    CELE_R13A5.8
    See related
    AllianceGenome:WB:WBGene00004420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in body wall musculature; excretory cell; intestine; pharynx; and tail. Orthologous to human RPL9 (ribosomal protein L9). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See rpl-9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (7572105..7572831, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ligand-Gated ion Channel Neighboring gene Transthyretin-like family protein Neighboring gene Transthyretin-like family protein Neighboring gene FBA_2 domain-containing protein Neighboring gene ncRNA Neighboring gene Pescadillo homolog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Large ribosomal subunit protein uL6
    NP_001370400.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7572105..7572831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001382918.2NP_001370400.1  Large ribosomal subunit protein uL6 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95Y90
      Conserved Domains (1) summary
      cl30086
      Location:1186
      Ribosomal_L6; Ribosomal protein L6