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    F13E9.11 Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 177980, updated on 2-Nov-2024

    Summary

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    Official Symbol
    F13E9.11
    Official Full Name
    Transmembrane protein
    Primary source
    WormBase:WBGene00008760
    Locus tag
    CELE_F13E9.11
    See related
    AllianceGenome:WB:WBGene00008760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM121B (transmembrane protein 121B). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See F13E9.11 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (10865258..10869135, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Histidine--tRNA ligase Neighboring gene Pre-mRNA-splicing factor RBM22 Neighboring gene PX domain-containing protein Neighboring gene Neuropeptide-Like Protein Neighboring gene FIP (Fungus-Induced Protein) Related

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein
    NP_001122770.1
    • Confirmed by transcript evidence
    NP_502015.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10865258..10869135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069614.5 → NP_502015.2  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502015.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      K8ESG8
      Conserved Domains (1) summary
      pfam14997
      Location:150 → 354
      CECR6_TMEM121; CECR6/TMEM121 family

    2. NM_001129298.4 → NP_001122770.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122770.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      K8ERZ3
      Conserved Domains (1) summary
      pfam14997
      Location:85 → 289
      CECR6_TMEM121; CECR6/TMEM121 family
    Nucleotide Protein
    Heading Accession and Version

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