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    Y18H1A.2 CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171662, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y18H1A.2
    Official Full Name
    CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein
    Primary source
    WormBase:WBGene00021208
    Locus tag
    CELE_Y18H1A.2
    See related
    AllianceGenome:WB:WBGene00021208
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human LENG1 (leukocyte receptor cluster member 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y18H1A.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (694976..698324, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Tyrosine-protein phosphatase domain-containing protein Neighboring gene Histidine phosphatase family protein Neighboring gene Rap-GAP domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ATP-dependent DNA helicase;ATP-dependent DNA helicase PIF1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CBF1-interacting co-repressor CIR N-terminal domain-containing protein;Cir_N domain-containing protein
    NP_001355497.1
    • Confirmed by transcript evidence
    NP_490771.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      694976..698324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001368447.4 → NP_001355497.1  Cir_N domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A3P6N6A5

    2. NM_058370.6 → NP_490771.2  CBF1-interacting co-repressor CIR N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A3P6MY32
    Nucleotide Protein
    Heading Accession and Version

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