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    ZC477.3 Coiled-coil domain-containing protein 51 [ Caenorhabditis elegans ]

    Gene ID: 177484, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZC477.3
    Official Full Name
    Coiled-coil domain-containing protein 51
    Primary source
    WormBase:WBGene00022618
    Locus tag
    CELE_ZC477.3
    See related
    AllianceGenome:WB:WBGene00022618
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human CCDC51 (coiled-coil domain containing 51). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZC477.3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (7103492..7105096)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RNase NYN domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Coiled-coil domain-containing protein 51
    NP_001023604.1
    • Confirmed by transcript evidence
    NP_001023605.2
    • Confirmed by transcript evidence
    NP_001122832.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7103492..7105096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028433.4 → NP_001023604.1  Coiled-coil domain-containing protein 51 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023604.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ70
      Conserved Domains (1) summary
      TIGR02169
      Location:48 → 281
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    2. NM_001028434.4 → NP_001023605.2  Coiled-coil domain-containing protein 51 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023605.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5WRS7
      Conserved Domains (1) summary
      PRK12704
      Location:48 → 152
      PRK12704; phosphodiesterase; Provisional

    3. NM_001129360.6 → NP_001122832.1  Coiled-coil domain-containing protein 51 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122832.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ71
      Conserved Domains (1) summary
      PRK12704
      Location:48 → 152
      PRK12704; phosphodiesterase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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