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    Y22D7AL.15 LITAF domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 189508, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y22D7AL.15
    Official Full Name
    LITAF domain-containing protein
    Primary source
    WormBase:WBGene00021253
    Locus tag
    CELE_Y22D7AL.15
    See related
    AllianceGenome:WB:WBGene00021253
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. Predicted to be located in endosome membrane and lysosomal membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y22D7AL.15 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (1658207..1659863, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene COX3 domain-containing protein Neighboring gene GH18 domain-containing protein Neighboring gene C2H2-type domain-containing protein Neighboring gene Ovule protein Neighboring gene Globin domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LITAF domain-containing protein
    NP_497438.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      1658207..1659863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065037.5 → NP_497438.2  LITAF domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497438.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q965P1
      Conserved Domains (2) summary
      smart00714
      Location:83 → 150
      LITAF; Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins
      PRK10263
      Location:7 → 89
      PRK10263; DNA translocase FtsK; Provisional
    Nucleotide Protein
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