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    ceh-1 Homeobox protein ceh-1 [ Caenorhabditis elegans ]

    Gene ID: 191614, updated on 9-Dec-2024

    Summary

    Official Symbol
    ceh-1
    Official Full Name
    Homeobox protein ceh-1
    Primary source
    WormBase:WBGene00000428
    Locus tag
    CELE_F16H11.4
    See related
    AllianceGenome:WB:WBGene00000428
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in DVC; lateral ganglion; and seam cell. Orthologous to human NKX1-1 (NK1 homeobox 1) and NKX1-2 (NK1 homeobox 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See ceh-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Sequence:
    Chromosome: X; NC_003284.9 (4653167..4654157, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Equilibrative nucleoside transporter 1 Neighboring gene ncRNA Neighboring gene Nuclear Hormone Receptor family Neighboring gene Major facilitator superfamily domain-containing protein 12

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Homeobox protein ceh-1
    NP_508796.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      4653167..4654157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076395.7NP_508796.2  Homeobox protein ceh-1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P53547
      Conserved Domains (2) summary
      COG5576
      Location:2118
      COG5576; Homeodomain-containing transcription factor [Transcription]
      pfam00046
      Location:4496
      Homeobox; Homeobox domain