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    R06C7.2 BEN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187640, updated on 2-Nov-2024

    Summary

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    Official Symbol
    R06C7.2
    Official Full Name
    BEN domain-containing protein
    Primary source
    WormBase:WBGene00011062
    Locus tag
    CELE_R06C7.2
    See related
    AllianceGenome:WB:WBGene00011062
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable SUMO transferase activity. Predicted to be involved in homologous chromosome pairing at meiosis. Predicted to be active in synaptonemal complex. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See R06C7.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (7233393..7234501, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Bromo domain-containing protein Neighboring gene Secreted protein;Sensitive to high expression protein 9, mitochondrial Neighboring gene non-specific serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene Argonaute protein wago-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables SUMO transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in homologous chromosome pairing at meiosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in synaptonemal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    BEN domain-containing protein
    NP_492044.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7233393..7234501 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059643.5 → NP_492044.2  BEN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492044.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21772
    Nucleotide Protein
    Heading Accession and Version

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