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    D2092.4 Thioredoxin domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172378, updated on 2-Nov-2024

    Summary

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    Official Symbol
    D2092.4
    Official Full Name
    Thioredoxin domain-containing protein
    Primary source
    WormBase:WBGene00017065
    Locus tag
    CELE_D2092.4
    See related
    AllianceGenome:WB:WBGene00017065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in myofibril. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See D2092.4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    8
    Sequence:
    Chromosome: I; NC_003279.8 (6612188..6615990, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Macoilin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TetraSPanin family Neighboring gene Translation initiation factor IF-2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    2. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in myofibril HDA PubMed 

    General protein information

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    Preferred Names
    Thioredoxin domain-containing protein
    NP_491903.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6612188..6615990 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059502.8 → NP_491903.2  Thioredoxin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491903.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91194
      Conserved Domains (2) summary
      PTZ00443
      Location:188 → 316
      PTZ00443; Thioredoxin domain-containing protein; Provisional
      cl00388
      Location:92 → 177
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version

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