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    F49E2.5 Nucleolar protein 16;Translation initiation factor IF-2 [ Caenorhabditis elegans ]

    Gene ID: 181175, updated on 9-Dec-2024

    Summary

    Official Symbol
    F49E2.5
    Official Full Name
    Nucleolar protein 16;Translation initiation factor IF-2
    Primary source
    WormBase:WBGene00009888
    Locus tag
    CELE_F49E2.5
    See related
    AllianceGenome:WB:WBGene00009888
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Is expressed in hypodermis; muscle cell; and neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See F49E2.5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    22
    Sequence:
    Chromosome: X; NC_003284.9 (9543652..9560804)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Deoxyribonuclease-2 Neighboring gene tRNA-Val Neighboring gene GTP 3',8-cyclase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    Nucleolar protein 16;Translation initiation factor IF-2
    NP_001024694.1
    • Confirmed by transcript evidence
    NP_001024695.1
    • Confirmed by transcript evidence
    NP_001360758.1
    • Confirmed by transcript evidence
    NP_001360760.1
    • Confirmed by transcript evidence
    NP_001360761.1
    • Confirmed by transcript evidence
    NP_001366700.1
    • Confirmed by transcript evidence
    NP_001366701.1
    • Confirmed by transcript evidence
    NP_001366703.1
    • Confirmed by transcript evidence
    NP_001366704.1
    • Confirmed by transcript evidence
    NP_001367019.1
    • Confirmed by transcript evidence
    NP_001367097.1
    • Confirmed by transcript evidence
    NP_001367224.1
    • Confirmed by transcript evidence
    NP_001368747.1
    • Confirmed by transcript evidence
    NP_001368748.1
    • Confirmed by transcript evidence
    NP_001368749.1
    • Confirmed by transcript evidence
    NP_001368750.1
    • Confirmed by transcript evidence
    NP_001368751.1
    • Confirmed by transcript evidence
    NP_001368752.1
    • Confirmed by transcript evidence
    NP_001368753.1
    • Confirmed by transcript evidence
    NP_001368754.1
    • Confirmed by transcript evidence
    NP_001368755.1
    • Confirmed by transcript evidence
    NP_001379062.1
    • Confirmed by transcript evidence
    NP_001379063.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      9543652..9560804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001029524.6NP_001024695.1  Nucleolar protein 16 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024695.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q565D1
      Conserved Domains (2) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
      pfam09420
      Location:10181072
      Nop16; Ribosome biogenesis protein Nop16
    2. NM_001029523.6NP_001024694.1  Nucleolar protein 16 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024694.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q565D2
      Conserved Domains (2) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
      pfam09420
      Location:9481002
      Nop16; Ribosome biogenesis protein Nop16
    3. NM_001373430.3NP_001360758.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKJ7
      Conserved Domains (2) summary
      PRK10811
      Location:834996
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    4. NM_001392822.1NP_001379063.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20626
      Conserved Domains (1) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    5. NM_001373432.4NP_001360760.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0ILU3
      Conserved Domains (1) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    6. NM_001381054.2NP_001368747.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IJD5
      Conserved Domains (1) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    7. NM_001381066.1NP_001368755.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IJF1
      Conserved Domains (1) summary
      pfam04747
      Location:1327
      DUF612; Protein of unknown function, DUF612
    8. NM_001381064.1NP_001366704.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20625
      Conserved Domains (1) summary
      pfam04747
      Location:1544
      DUF612; Protein of unknown function, DUF612
    9. NM_001381061.2NP_001368751.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0INR9
      Conserved Domains (1) summary
      pfam04747
      Location:1614
      DUF612; Protein of unknown function, DUF612
    10. NM_001373433.3NP_001360761.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IM76
      Conserved Domains (2) summary
      PRK10811
      Location:579770
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    11. NM_001381055.1NP_001366703.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45544
      Conserved Domains (1) summary
      pfam04747
      Location:1486
      DUF612; Protein of unknown function, DUF612
    12. NM_001381056.1NP_001366700.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45541
      Conserved Domains (1) summary
      pfam04747
      Location:1627
      DUF612; Protein of unknown function, DUF612
    13. NM_001381057.1NP_001367097.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6BEV6
      Conserved Domains (1) summary
      pfam04747
      Location:1442
      DUF612; Protein of unknown function, DUF612
    14. NM_001381058.1NP_001368748.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKI2
      Conserved Domains (2) summary
      PRK10811
      Location:751913
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1407
      DUF612; Protein of unknown function, DUF612
    15. NM_001381059.1NP_001368749.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKE7
      Conserved Domains (2) summary
      PRK10811
      Location:458657
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1407
      DUF612; Protein of unknown function, DUF612
    16. NM_001381060.1NP_001368750.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKZ1
      Conserved Domains (2) summary
      PRK10811
      Location:566757
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1592
      DUF612; Protein of unknown function, DUF612
    17. NM_001381062.1NP_001368752.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0INJ4
      Conserved Domains (2) summary
      PRK10811
      Location:496687
      rne; ribonuclease E; Reviewed
      pfam04747
      Location:1522
      DUF612; Protein of unknown function, DUF612
    18. NM_001381063.1NP_001368753.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V6M3D2
      Conserved Domains (1) summary
      pfam04747
      Location:1544
      DUF612; Protein of unknown function, DUF612
    19. NM_001381065.1NP_001368754.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKK7
      Conserved Domains (1) summary
      pfam04747
      Location:1327
      DUF612; Protein of unknown function, DUF612
    20. NM_001381067.1NP_001367224.1  Nucleolar protein 16 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0VWM5
      Conserved Domains (1) summary
      pfam04747
      Location:1444
      DUF612; Protein of unknown function, DUF612
    21. NM_001392823.1NP_001379062.1  Translation initiation factor IF-2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45543
      Conserved Domains (1) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612
    22. NM_001381069.1NP_001367019.1  Translation initiation factor IF-2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4I3
      Conserved Domains (1) summary
      pfam04747
      Location:1407
      DUF612; Protein of unknown function, DUF612
    23. NM_001381070.1NP_001366701.1  Translation initiation factor IF-2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45542
      Conserved Domains (1) summary
      pfam04747
      Location:1504
      DUF612; Protein of unknown function, DUF612