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    col-187 Col_cuticle_N domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181685, updated on 2-Nov-2024

    Summary

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    Official Symbol
    col-187
    Official Full Name
    Col_cuticle_N domain-containing protein
    Primary source
    WormBase:WBGene00000760
    Locus tag
    CELE_C30F2.1
    See related
    AllianceGenome:WB:WBGene00000760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See col-187 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Sequence:
    Chromosome: X; NC_003284.9 (16072895..16074923)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Putative uncharacterized protein T27A8.3 Neighboring gene Neuropeptide-Like Protein Neighboring gene RING-type domain-containing protein Neighboring gene Intrinsically Disordered Protein, expressed in Pharynx

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Col_cuticle_N domain-containing protein
    NP_510630.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      16072895..16074923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078229.3 → NP_510630.1  Col_cuticle_N domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510630.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18327
      Conserved Domains (1) summary
      pfam01391
      Location:231 → 286
      Collagen; Collagen triple helix repeat (20 copies)
    Nucleotide Protein
    Heading Accession and Version

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