U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG11816 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32310, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG11816provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030495
    Locus tag
    Dmel_CG11816
    See related
    AllianceGenome:FB:FBgn0030495
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11816
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG11816 in Genome Data Viewer
    Location:
    12A4-12A4; 1-44 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (13552559..13555800, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (13446592..13449833, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Cuticular protein 12A Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    2. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG11816-PA
    CG11816-PB
    CG11816-PC
    CG11816-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      13552559..13555800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272586.1 → NP_001259515.1  uncharacterized protein Dmel_CG11816, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259515.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHJ4, M9PH18

    2. NM_001272587.1 → NP_001259516.1  uncharacterized protein Dmel_CG11816, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259516.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHJ4, M9PH18

    3. NM_001272585.1 → NP_001259514.1  uncharacterized protein Dmel_CG11816, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259514.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHJ4, Q9VYC0

    4. NM_132669.2 → NP_572897.1  uncharacterized protein Dmel_CG11816, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572897.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHJ4, Q9VYC0
      Related
      FBpp0073616
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PH18 M9PH18
    Q9VYC0 Q9VYC0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools