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    CG13321 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36430, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13321provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033787
    Locus tag
    Dmel_CG13321
    See related
    AllianceGenome:FB:FBgn0033787
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13321
    Summary
    Enables D-mannose binding activity and rhamnose binding activity. Predicted to be active in cytoplasm. Is expressed in adult head; anterior midgut primordium; embryonic proventriculus; embryonic/larval midgut; and posterior midgut primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13321 in Genome Data Viewer
    Location:
    49E4-49E4; 2-67 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12953112..12955712)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8840617..8843217)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Scaffold protein containing ankyrin repeats and SAM domain Neighboring gene Multi drug resistance 49 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Posterior sex combs Neighboring gene long non-coding RNA:CR44339

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modular toolset of phiC31-based fluorescent protein tagging vectors for Drosophila. Luo J, et al. Fly (Austin), 2019 Mar-Dec. PMID 30885036, Free PMC Article
    2. Carbohydrate-binding ability of a recombinant protein containing the DM9 motif from Drosophila melanogaster. Hatakeyama T, et al. J Biochem, 2024 May 31. PMID 38324702
    3. Polycomb group genes Psc and Su(z)2 maintain somatic stem cell identity and activity in Drosophila. Morillo Prado JR, et al. PLoS One, 2012. PMID 23285219, Free PMC Article
    4. split-intein Gal4 provides intersectional genetic labeling that is repressible by Gal80. Ewen-Campen B, et al. Proc Natl Acad Sci U S A, 2023 Jun 13. PMID 37276389, Free PMC Article
    5. Prospero acts as a binary switch between self-renewal and differentiation in Drosophila neural stem cells. Choksi SP, et al. Dev Cell, 2006 Dec. PMID 17141154

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables D-mannose binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables rhamnose binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13321-PA
    CG13321-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12953112..12955712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299438.1 → NP_001286367.1  uncharacterized protein Dmel_CG13321, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286367.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JZZ3
      Conserved Domains (2) summary
      smart00696
      Location:216 → 286
      DM9; Repeats found in Drosophila proteins
      pfam11901
      Location:166 → 276
      DUF3421; Protein of unknown function (DUF3421)

    2. NM_136987.4 → NP_610831.1  uncharacterized protein Dmel_CG13321, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610831.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JZZ3
      Related
      FBpp0086905
      Conserved Domains (2) summary
      smart00696
      Location:216 → 286
      DM9; Repeats found in Drosophila proteins
      pfam11901
      Location:166 → 276
      DUF3421; Protein of unknown function (DUF3421)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7JZZ3 Q7JZZ3

    Gene LinkOut

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