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    CHOp24 CHOp24 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31382, updated on 9-Dec-2024

    Summary

    Official Symbol
    CHOp24provided by FlyBase
    Official Full Name
    CHOp24provided by FlyBase
    Primary source
    FLYBASE:FBgn0029709
    Locus tag
    Dmel_CG3564
    See related
    AllianceGenome:FB:FBgn0029709
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3564; Dmel\CG3564; emp24; Emp24; p24; p24/p24beta1
    Summary
    Enables cargo receptor activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport and wing disc development. Located in endomembrane system. Is expressed in several structures, including adult head; adult heart; embryonic/larval midgut primordium; gland; and gut section. Orthologous to human TMED2 (transmembrane p24 trafficking protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CHOp24 in Genome Data Viewer
    Location:
    4C7-4C7; 1-8 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4540908..4542506)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4434941..4436539)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR32773 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ruby Neighboring gene Usf

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cargo receptor activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables cargo receptor activity ISM
    Inferred from Sequence Model
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Golgi vesicle transport ISM
    Inferred from Sequence Model
    more info
    PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in wing disc development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in COPII-coated ER to Golgi transport vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endomembrane system HDA PubMed 
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    PubMed 

    General protein information

    Preferred Names
    CHOp24
    Names
    CG3564-PA
    CG3564-PB
    CHOp24-PA
    CHOp24-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      4540908..4542506
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297933.1NP_001284862.1  CHOp24, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284862.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W4K0
      Conserved Domains (1) summary
      pfam01105
      Location:24203
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD
    2. NM_131937.4NP_572165.1  CHOp24, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572165.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W4K0
      Related
      FBpp0070643
      Conserved Domains (1) summary
      pfam01105
      Location:24203
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD