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    CG3708 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31039, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3708provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040345
    Locus tag
    Dmel_CG3708
    See related
    AllianceGenome:FB:FBgn0040345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    152685_at; Dmel\CG3708; EG:BACR7A4.18
    Summary
    Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in nucleosome assembly. Predicted to be located in chromatin. Predicted to be active in nucleus. Is expressed in organism. Orthologous to human NAP1L3 (nucleosome assembly protein 1 like 3) and NAP1L5 (nucleosome assembly protein 1 like 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG3708 in Genome Data Viewer
    Location:
    1D2-1D2; 1-0 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (928798..930098, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (822831..824131, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Leucine zipper like transcription regulator 1 Neighboring gene Mediator complex subunit 22 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene TRAM

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Recurrent Innovation at Genes Required for Telomere Integrity in Drosophila. Lee YC, et al. Mol Biol Evol, 2017 Feb 1. PMID 27836984, Free PMC Article
    2. Highly efficient genome modifications mediated by CRISPR/Cas9 in Drosophila. Yu Z, et al. Genetics, 2013 Sep. PMID 23833182, Free PMC Article
    3. Molecular population genetics of accessory gland protein genes and testis-expressed genes in Drosophila mojavensis and D. arizonae. Wagstaff BJ, et al. Genetics, 2005 Nov. PMID 16085702, Free PMC Article
    4. Functional Transcription Factor Target Networks Illuminate Control of Epithelial Remodelling. Overton IM, et al. Cancers (Basel), 2020 Sep 30. PMID 33007944, Free PMC Article
    5. Genome-wide analysis on inbreeding effects on gene expression in Drosophila melanogaster. Kristensen TN, et al. Genetics, 2005 Sep. PMID 15944359, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleosome assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3708-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      928798..930098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130515.3 → NP_569871.2  uncharacterized protein Dmel_CG3708 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569871.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KW25, Q9U1L4, Q9W5C4
      Conserved Domains (1) summary
      pfam00956
      Location:71 → 336
      NAP; Nucleosome assembly protein (NAP)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7KW25 Q7KW25
    Q9U1L4 Q9U1L4

    Gene LinkOut

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