U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG11444 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31388, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG11444provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029715
    Locus tag
    Dmel_CG11444
    See related
    AllianceGenome:FB:FBgn0029715
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11444
    Summary
    Predicted to enable RNA binding activity. Predicted to be active in cytosol. Is expressed in several structures, including embryonic/larval midgut primordium; ganglia; gut section; mesoderm; and visceral mesoderm derivative. Orthologous to human PDAP1 (PDGFA associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG11444 in Genome Data Viewer
    Location:
    4C7-4C7; 1-8 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4553117..4554398, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4447150..4448431, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR32773 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A widespread family of heat-resistant obscure (Hero) proteins protect against protein instability and aggregation. Tsuboyama K, et al. PLoS Biol, 2020 Mar. PMID 32163402, Free PMC Article
    2. FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas. Krause SA, et al. Nucleic Acids Res, 2022 Jan 7. PMID 34718735, Free PMC Article
    3. Neuronal remodeling during metamorphosis is regulated by the alan shepard (shep) gene in Drosophila melanogaster. Chen D, et al. Genetics, 2014 Aug. PMID 24931409, Free PMC Article
    4. Genome-scale functional characterization of Drosophila developmental enhancers in vivo. Kvon EZ, et al. Nature, 2014 Aug 7. PMID 24896182
    5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG11444-PA
    CG11444-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      4553117..4554398 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297934.1 → NP_001284863.1  uncharacterized protein Dmel_CG11444, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284863.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W4J4
      Conserved Domains (1) summary
      pfam10252
      Location:115 → 190
      PP28; Casein kinase substrate phosphoprotein PP28

    2. NM_131943.5 → NP_572171.1  uncharacterized protein Dmel_CG11444, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572171.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W4J4
      Related
      FBpp0070666
      Conserved Domains (1) summary
      pfam10252
      Location:115 → 190
      PP28; Casein kinase substrate phosphoprotein PP28
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W4J4 Q9W4J4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous