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    1700020N15Rikl RIKEN cDNA 1700020N15 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 689600, updated on 27-Nov-2024

    Summary

    Official Symbol
    1700020N15Riklprovided by RGD
    Official Full Name
    RIKEN cDNA 1700020N15 gene likeprovided by RGD
    Primary source
    RGD:1589978
    See related
    EnsemblRapid:ENSRNOG00000073787 AllianceGenome:RGD:1589978
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Aff2; RGD1589978
    Expression
    Restricted expression toward (RPKM 126.2) See more
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    Genomic context

    See 1700020N15Rikl in Genome Data Viewer
    Location:
    Xq37
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (152464544..152465225, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (147419923..147420604, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (153456329..153457010, complement)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene fragile X messenger ribonucleoprotein 1 Neighboring gene FMR1 neighbor Neighboring gene nucleolar pre-rRNA processing protein NIP7, pseudogene 14 Neighboring gene disks large homolog 5-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC689600
    Names
    rCG38983

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106351.1NP_001099821.1  uncharacterized protein LOC689600

      See identical proteins and their annotated locations for NP_001099821.1

      Status: PREDICTED

      Source sequence(s)
      CH474085
      UniProtKB/TrEMBL
      A6KQ89, D4ABA7
      Related
      ENSRNOP00000069506.1, ENSRNOT00000084905.3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      152464544..152465225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)