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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853979, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001812
    Locus tag
    YKR104W
    See related
    AllianceGenome:SGD:S000001812; FungiDB:YKR104W; VEuPathDB:YKR104W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    NFT1
    Summary
    Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Orthologous to human ABCC10 (ATP binding cassette subfamily C member 10). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (656836..657756)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Flo10p Neighboring gene putative multidrug transporter NFT1 Neighboring gene basic amino acid transporter Neighboring gene glutathione exchanger

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A region within a lumenal loop of Saccharomyces cerevisiae Ycf1p directs proteolytic processing and substrate specificity. Mason DL, et al. Eukaryot Cell, 2003 Jun. PMID 12796304, Free PMC Article
    2. Complete inventory of the yeast ABC proteins. Decottignies A, et al. Nat Genet, 1997 Feb. PMID 9020838
    3. Genome-wide protein interaction screens reveal functional networks involving Sm-like proteins. Fromont-Racine M, et al. Yeast, 2000 Jun 30. PMID 10900456, Free PMC Article
    4. Mapping the functional yeast ABC transporter interactome. Snider J, et al. Nat Chem Biol, 2013 Sep. PMID 23831759, Free PMC Article
    5. Complete DNA sequence of yeast chromosome XI. Dujon B, et al. Nature, 1994 Jun 2. PMID 8196765

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_013030.1
    • Putative transporter of the MRP subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      656836..657756
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179894.1 → NP_013030.1  TPA: uncharacterized protein YKR104W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013030.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VXG5, P0CE69
      UniProtKB/TrEMBL
      N1P884
      Conserved Domains (1) summary
      cd03369
      Location:27 → 270
      ABCC_NFT1; ATP-binding cassette domain 2 of NFT1, subfamily C
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CE69.1

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