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    Vmn1r199 vomeronasal 1 receptor 199 [ Mus musculus (house mouse) ]

    Gene ID: 171247, updated on 27-Nov-2024

    Summary

    Official Symbol
    Vmn1r199provided by MGI
    Official Full Name
    vomeronasal 1 receptor 199provided by MGI
    Primary source
    MGI:MGI:2159662
    See related
    Ensembl:ENSMUSG00000069292 AllianceGenome:MGI:2159662
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rh4
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Vmn1r199 in Genome Data Viewer
    Location:
    13 A3.1; 13 8.64 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22566708..22567811)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (22382538..22383641)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 198 Neighboring gene vomeronasal 1 receptor, pseudogene 101 Neighboring gene vomeronasal 1 receptor, pseudogene 102 Neighboring gene vomeronasal 1 receptor 200

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC130175

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 199
    Names
    vomernasal 1 receptor Vmn1r199
    vomeronasal 1 receptor, H4
    vomeronasal type 1 receptor H4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134213.1NP_598974.1  vomeronasal 1 receptor 199

      See identical proteins and their annotated locations for NP_598974.1

      Status: PROVISIONAL

      Source sequence(s)
      AY065530
      Consensus CDS
      CCDS26317.1
      UniProtKB/TrEMBL
      F6MCI9, F6MCJ5, F6MCK1, F6MCK4, Q8R280
      Related
      ENSMUSP00000089326.4, ENSMUST00000091732.4
      Conserved Domains (1) summary
      pfam03402
      Location:78338
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      22566708..22567811
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)