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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163626.1 → NP_001157098.1 NADPH oxidase activator 1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1.
- Source sequence(s)
-
AK087263, AL732585
- Consensus CDS
-
CCDS50524.1
- UniProtKB/Swiss-Prot
-
Q8CJ00
- Related
- ENSMUSP00000110014.2, ENSMUST00000114373.8
- Conserved Domains (5) summary
-
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- pfam07719
Location:38 → 68
- TPR_2; Tetratricopeptide repeat
- pfam13414
Location:38 → 100
- TPR_11; TPR repeat
- cl02720
Location:278 → 355
- PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
- cl17036
Location:365 → 417
- SH3; Src Homology 3 domain superfamily
-
NM_172204.4 → NP_757341.3 NADPH oxidase activator 1 isoform 1
See identical proteins and their annotated locations for NP_757341.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AK087263, AL732585
- Consensus CDS
-
CCDS15749.1
- UniProtKB/Swiss-Prot
- A2AJA1, Q80SY2, Q8BU68, Q8CJ00
- Related
- ENSMUSP00000037423.8, ENSMUST00000044018.8
- Conserved Domains (5) summary
-
- sd00006
Location:38 → 66
- TPR; TPR repeat [structural motif]
- pfam07719
Location:38 → 68
- TPR_2; Tetratricopeptide repeat
- pfam13414
Location:38 → 100
- TPR_11; TPR repeat
- cl02720
Location:286 → 363
- PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
- cl17036
Location:373 → 425
- SH3; Src Homology 3 domain superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
24975679..24985217 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)