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    Golga7 golgin A7 [ Mus musculus (house mouse) ]

    Gene ID: 57437, updated on 27-Nov-2024

    Summary

    Official Symbol
    Golga7provided by MGI
    Official Full Name
    golgin A7provided by MGI
    Primary source
    MGI:MGI:1931029
    See related
    Ensembl:ENSMUSG00000015341 AllianceGenome:MGI:1931029
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GCP16; HSPC041; GOLGA3AP1; C130038N16Rik
    Summary
    Predicted to be involved in establishment of protein localization to membrane; peptidyl-L-cysteine S-palmitoylation; and protein stabilization. Predicted to act upstream of or within Golgi to plasma membrane transport. Predicted to be located in Golgi membrane. Predicted to be part of palmitoyltransferase complex. Predicted to be active in Golgi stack. Is expressed in several structures, including alimentary system; eye; genitourinary system; integumental system; and nervous system. Orthologous to human GOLGA7 (golgin A7). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E14 (RPKM 35.4), limb E14.5 (RPKM 33.1) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Golga7 in Genome Data Viewer
    Location:
    8 A2; 8 11.42 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (23731342..23747096, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (23241326..23258903, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30247 Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene STARR-positive B cell enhancer ABC_E10494 Neighboring gene STARR-positive B cell enhancer ABC_E356 Neighboring gene GINS complex subunit 4 Neighboring gene predicted gene, 39141 Neighboring gene predicted gene, 24335 Neighboring gene predicted gene, 53407

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Gene trapped (1) 
    • Targeted (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC30271, MGC102434, MGC118465

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Golgi to plasma membrane protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in Golgi to plasma membrane protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within Golgi to plasma membrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in peptidyl-L-cysteine S-palmitoylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in peptidyl-L-cysteine S-palmitoylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein stabilization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in Golgi stack IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi stack ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi stack ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of palmitoyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of palmitoyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of palmitoyltransferase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    golgin subfamily A member 7
    Names
    golgi autoantigen, golgin subfamily a, 7

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001042484.1NP_001035949.1  golgin subfamily A member 7

      See identical proteins and their annotated locations for NP_001035949.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC126038, AK150696, BY330336
      Consensus CDS
      CCDS40297.1
      UniProtKB/Swiss-Prot
      Q8BN18, Q91W53, Q9JJE0
      Related
      ENSMUSP00000062983.7, ENSMUST00000051094.9
      Conserved Domains (1) summary
      pfam10256
      Location:12124
      Erf4; Golgin subfamily A member 7/ERF4 family
    2. NM_020585.2NP_065610.2  golgin subfamily A member 7

      See identical proteins and their annotated locations for NP_065610.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC126038, AK150696, BY330336
      Consensus CDS
      CCDS40297.1
      UniProtKB/Swiss-Prot
      Q8BN18, Q91W53, Q9JJE0
      Related
      ENSMUSP00000112935.2, ENSMUST00000121783.7
      Conserved Domains (1) summary
      pfam10256
      Location:12124
      Erf4; Golgin subfamily A member 7/ERF4 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      23731342..23747096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006509179.5XP_006509242.1  golgin subfamily A member 7 isoform X1

      See identical proteins and their annotated locations for XP_006509242.1

      Conserved Domains (1) summary
      pfam10256
      Location:12123
      Erf4; Golgin subfamily A member 7/ERF4 family