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    Gm16404 predicted gene 16404 [ Mus musculus (house mouse) ]

    Gene ID: 100039055, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm16404provided by MGI
    Official Full Name
    predicted gene 16404provided by MGI
    Primary source
    MGI:MGI:3647157
    See related
    Ensembl:ENSMUSG00000126801 AllianceGenome:MGI:3647157
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG625711
    Expression
    Restricted expression toward testis adult (RPKM 7.5) See more
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    Genomic context

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    See Gm16404 in Genome Data Viewer
    Location:
    X A5; X 30.06 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (54596956..54613817)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (55551596..55568457)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 6660 Neighboring gene STARR-seq mESC enhancer starr_47198 Neighboring gene predicted gene 14625 Neighboring gene STARR-seq mESC enhancer starr_47199 Neighboring gene STARR-seq mESC enhancer starr_47200 Neighboring gene STARR-seq mESC enhancer starr_47201 Neighboring gene STARR-seq mESC enhancer starr_47202 Neighboring gene predicted gene 14622 Neighboring gene predicted gene 6664

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Clone Names

    • MGC198646

    General protein information

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    Preferred Names
    Slx-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001220497.1 → NP_001207426.1  Slx-like

      See identical proteins and their annotated locations for NP_001207426.1

      Status: VALIDATED

      Source sequence(s)
      BC171941
      UniProtKB/TrEMBL
      B7ZN82
      Related
      ENSMUST00000278261.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      54596956..54613817
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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