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    Gm49249 predicted gene, 49249 [ Mus musculus (house mouse) ]

    Gene ID: 545086, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm49249provided by MGI
    Official Full Name
    predicted gene, 49249provided by MGI
    Primary source
    MGI:MGI:6118719
    See related
    AllianceGenome:MGI:6118719
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm49249 in Genome Data Viewer
    Location:
    15; 15 A1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (8540713..8562273)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (8511229..8532789)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene NIPBL cohesin loading factor Neighboring gene uncharacterized LOC102634078 Neighboring gene STARR-seq mESC enhancer starr_37899 Neighboring gene STARR-positive B cell enhancer ABC_E2437 Neighboring gene STARR-seq mESC enhancer starr_37901 Neighboring gene predicted gene, 31282 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:8462039-8462148 Neighboring gene STARR-seq mESC enhancer starr_37902 Neighboring gene STARR-seq mESC enhancer starr_37903 Neighboring gene STARR-seq mESC enhancer starr_37904 Neighboring gene STARR-seq mESC enhancer starr_37905 Neighboring gene STARR-seq mESC enhancer starr_37906 Neighboring gene predicted gene, 46508 Neighboring gene STARR-positive B cell enhancer ABC_E7359 Neighboring gene STARR-seq mESC enhancer starr_37907 Neighboring gene solute carrier family 1 (glial high affinity glutamate transporter), member 3 Neighboring gene STARR-seq mESC enhancer starr_37908 Neighboring gene predicted gene, 57815

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      8540713..8562273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003951627.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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