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    ECM9 Ecm9p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853873, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ECM9
    Official Full Name
    Ecm9p
    Primary source
    SGD:S000001712
    Locus tag
    YKR004C
    See related
    AllianceGenome:SGD:S000001712; FungiDB:YKR004C; VEuPathDB:YKR004C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    YKR004C-A
    Summary
    Predicted to contribute to Rab geranylgeranyltransferase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ECM9 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    2
    Sequence:
    Chromosome: XI; NC_001143.9 (446799..448036, complement)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene polynucleotide adenylyltransferase PAP1 Neighboring gene oxysterol-binding protein OSH6 Neighboring gene uncharacterized protein Neighboring gene mitochondrial 54S ribosomal protein YmL13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of new cell size control genes in S. cerevisiae. Dungrawala H, et al. Cell Div, 2012 Dec 12. PMID 23234503, Free PMC Article
    2. Mass-murdering: deletion of twenty-three ORFs from Saccharomyces cerevisiae chromosome XI reveals five genes essential for growth and three genes conferring detectable mutant phenotype. Wysocki R, et al. Gene, 1999 Mar 18. PMID 10095102
    3. Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae. Lussier M, et al. Genetics, 1997 Oct. PMID 9335584, Free PMC Article
    4. Fusion, fission, and transport control asymmetric inheritance of mitochondria and protein aggregates. Böckler S, et al. J Cell Biol, 2017 Aug 7. PMID 28615194, Free PMC Article
    5. Systematic analysis of bypass suppression of essential genes. van Leeuwen J, et al. Mol Syst Biol, 2020 Sep. PMID 32939983, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    contributes_to Rab geranylgeranyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Rab-protein geranylgeranyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ecm9p
    NP_012929.4
    • Essential protein involved in cell wall maintenance; also involved in regulatory pathway determining cell division readiness under stress; shows decreased viability under osmotic stress and increased resistance to calcofluor white

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      446799..448036 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179794.3 → NP_012929.4  TPA: Ecm9p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012929.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VXU0, Q02202, Q870H4
      UniProtKB/TrEMBL
      A6ZZW9, B3LR88, C7GQG4, C8ZCH0, N1P0F7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q02202.2

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