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    LEO1 Leo1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854290, updated on 9-Dec-2024

    Summary

    Official Symbol
    LEO1
    Official Full Name
    Leo1p
    Primary source
    SGD:S000005649
    Locus tag
    YOR123C
    See related
    AllianceGenome:SGD:S000005649; FungiDB:YOR123C; VEuPathDB:YOR123C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables several functions, including RNA polymerase II C-terminal domain phosphoserine binding activity; RNA polymerase II-specific DNA-binding transcription factor binding activity; and transcription coregulator activity. Involved in several processes, including DNA-templated transcription; positive regulation of DNA-templated transcription, elongation; and regulation of transcription-coupled nucleotide-excision repair. Located in nucleus. Part of Cdc73/Paf1 complex. Orthologous to human LEO1 (LEO1 homolog, Paf1/RNA polymerase II complex component). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See LEO1 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (553176..554570, complement)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene glycerol 2-dehydrogenase (NADP(+)) GCY1 Neighboring gene profilin Neighboring gene ubiquitin-specific protease UBP2 Neighboring gene putative monooxygenase CAT5

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Component Evidence Code Pubs
    part_of Cdc73/Paf1 complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of Cdc73/Paf1 complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Leo1p
    NP_014766.1
    • Component of the Paf1 complex; which associates with RNA polymerase II and is involved in histone methylation; plays a role in regulating Ty1 transposition; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      553176..554570 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183542.1NP_014766.1  TPA: Leo1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014766.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W2I1, P38439
      UniProtKB/TrEMBL
      A6ZNX0, B3LJG5, C8ZI85, N1NVS8
      Conserved Domains (1) summary
      pfam04004
      Location:169335
      Leo1; Leo1-like protein