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    9530050K03Rik RIKEN cDNA 9530050K03 gene [ Mus musculus (house mouse) ]

    Gene ID: 100417707, updated on 17-Aug-2024

    Summary

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    Official Symbol
    9530050K03Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 9530050K03 geneprovided by MGI
    Primary source
    MGI:MGI:1925871
    See related
    AllianceGenome:MGI:1925871
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See 9530050K03Rik in Genome Data Viewer
    Location:
    12 E; 12 50.43 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (100045749..100046654, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (100079490..100080395, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_33029 Neighboring gene STARR-positive B cell enhancer mm9_chr12:101140770-101141071 Neighboring gene predicted gene, 57807 Neighboring gene tyrosyl-DNA phosphodiesterase 1 Neighboring gene STARR-seq mESC enhancer starr_33030 Neighboring gene potassium channel, subfamily K, member 13 Neighboring gene predicted gene, 51957 Neighboring gene STARR-positive B cell enhancer mm9_chr12:101348195-101348496 Neighboring gene STARR-positive B cell enhancer ABC_E11523 Neighboring gene protease (prosome, macropain) 26S subunit, ATPase 1 Neighboring gene nrde-2 necessary for RNA interference, domain containing Neighboring gene STARR-positive B cell enhancer ABC_E5350

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • malate dehydrogenase 1, NAD (soluble) pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_018280.3 

      Range
      101..1006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      100045749..100046654 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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