U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Lyzl4os lysozyme-like 4, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 75384, updated on 22-Oct-2024

    Summary

    Official Symbol
    Lyzl4osprovided by MGI
    Official Full Name
    lysozyme-like 4, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1922634
    See related
    Ensembl:ENSMUSG00000084995 AllianceGenome:MGI:1922634
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930589B17Rik; 4930596M17Rik
    Expression
    Restricted expression toward testis adult (RPKM 63.7) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Lyzl4os in Genome Data Viewer
    Location:
    9 F4; 9 72.46 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (121416086..121443321)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (121587020..121614255)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 38661 Neighboring gene cholecystokinin Neighboring gene predicted gene, 47095 Neighboring gene lysozyme-like 4 Neighboring gene STARR-seq mESC enhancer starr_25538 Neighboring gene vasoactive intestinal peptide receptor 1 Neighboring gene STARR-positive B cell enhancer ABC_E10592 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:121591571-121591680 Neighboring gene STARR-positive B cell enhancer mm9_chr9:121606658-121606959 Neighboring gene SEC22 homolog C, vesicle trafficking protein Neighboring gene STARR-positive B cell enhancer ABC_E11426

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040740.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK016399
      Related
      ENSMUST00000156364.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      121416086..121443321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)