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    Vmn2r4 vomeronasal 2, receptor 4 [ Mus musculus (house mouse) ]

    Gene ID: 637053, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn2r4provided by MGI
    Official Full Name
    vomeronasal 2, receptor 4provided by MGI
    Primary source
    MGI:MGI:3648229
    See related
    Ensembl:ENSMUSG00000092049 AllianceGenome:MGI:3648229
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG637053
    Summary
    Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Vmn2r4 in Genome Data Viewer
    Location:
    3 E1; 3 30.15 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (64295982..64322741, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (64388561..64415320, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor, pseudogene 4 Neighboring gene vomeronasal 2 receptor 128 Neighboring gene vomeronasal 2, receptor, pseudogene 6 Neighboring gene vomeronasal 2, receptor, pseudogene 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    vomeronasal receptor Vmn2r4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001385080.1NP_001372009.1  vomeronasal receptor Vmn2r4 precursor

      Status: VALIDATED

      Source sequence(s)
      AC116599
      Consensus CDS
      CCDS50921.1
      UniProtKB/TrEMBL
      K7N784
      Related
      ENSMUSP00000135228.2, ENSMUST00000175724.9
      Conserved Domains (3) summary
      cd15280
      Location:622874
      7tmC_V2R-like; vomeronasal type-2 receptor-like proteins, member of the class C family of seven-transmembrane G protein-coupled receptors
      pfam07562
      Location:549602
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:55541
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      64295982..64322741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036163211.1XP_036019104.1  vomeronasal receptor Vmn2r4 isoform X1

      UniProtKB/TrEMBL
      K7N784
      Conserved Domains (3) summary
      cd15280
      Location:622874
      7tmC_V2R-like; vomeronasal type-2 receptor-like proteins, member of the class C family of seven-transmembrane G protein-coupled receptors
      pfam07562
      Location:549602
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:55541
      Periplasmic_Binding_Protein_type1; Type 1 periplasmic binding fold superfamily

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001104615.1: Suppressed sequence

      Description
      NM_001104615.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.