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    Gm21859 predicted gene, 21859 [ Mus musculus (house mouse) ]

    Gene ID: 545180, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm21859provided by MGI
    Official Full Name
    predicted gene, 21859provided by MGI
    Primary source
    MGI:MGI:5434023
    See related
    Ensembl:ENSMUSG00000095369 AllianceGenome:MGI:5434023
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm21859 in Genome Data Viewer
    Location:
    16; 16 A1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (10729876..10732661, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (10912012..10914797, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E8907 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:10836584-10836853 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:10844126-10844349 Neighboring gene cyclin Y-like 1 pseudogene Neighboring gene RecQ mediated genome instability 2 Neighboring gene predicted gene, 53936 Neighboring gene LPS-induced TN factor Neighboring gene STARR-positive B cell enhancer mm9_chr16:10979493-10979793 Neighboring gene STARR-positive B cell enhancer mm9_chr16:10993126-10993426 Neighboring gene predicted gene 4262

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_131135.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC082544
      Related
      ENSMUST00000335668.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      10729876..10732661 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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