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    Slc25a35 solute carrier family 25, member 35 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 497933, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Slc25a35provided by RGD
    Official Full Name
    solute carrier family 25, member 35provided by RGD
    Primary source
    RGD:1598229
    See related
    EnsemblRapid:ENSRNOG00000004668 AllianceGenome:RGD:1598229
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in mitochondrion. Orthologous to human SLC25A35 (solute carrier family 25 member 35). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 27.4), Adrenal (RPKM 20.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Slc25a35 in Genome Data Viewer
    Location:
    10q24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (54172138..54176359)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (53672851..53677501)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (55554911..55559083)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S4, X-linked, pseudogene 7 Neighboring gene Rho guanine nucleotide exchange factor 15 Neighboring gene uncharacterized LOC134480814 Neighboring gene RAN guanine nucleotide release factor Neighboring gene phosphoribosylformylglycinamidine synthase Neighboring gene small nucleolar RNA SNORA7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context. Morgenstern M, et al. Cell Metab, 2021 Dec 7. PMID 34800366, Free PMC Article
    2. A mitochondrial protein compendium elucidates complex I disease biology. Pagliarini DJ, et al. Cell, 2008 Jul 11. PMID 18614015, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 25 member 35

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109033.2 → NP_001102503.1  solute carrier family 25 member 35

      See identical proteins and their annotated locations for NP_001102503.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158839
      UniProtKB/TrEMBL
      A0A8I5ZJN4, A6HFM1, B0BNI6, F7F327
      Related
      ENSRNOP00000078053.2, ENSRNOT00000096370.2
      Conserved Domains (1) summary
      pfam00153
      Location:209 → 298
      Mito_carr; Mitochondrial carrier protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      54172138..54176359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039086582.2 → XP_038942510.1  solute carrier family 25 member 35 isoform X3

      UniProtKB/TrEMBL
      A6HFM2
      Conserved Domains (1) summary
      pfam00153
      Location:134 → 223
      Mito_carr; Mitochondrial carrier protein

    2. XM_006246776.5 → XP_006246838.1  solute carrier family 25 member 35 isoform X1

      See identical proteins and their annotated locations for XP_006246838.1

      UniProtKB/TrEMBL
      A0A8I5ZJN4, A6HFM1, B0BNI6, F7F327
      Conserved Domains (1) summary
      pfam00153
      Location:209 → 298
      Mito_carr; Mitochondrial carrier protein

    3. XM_063269622.1 → XP_063125692.1  solute carrier family 25 member 35 isoform X2

    4. XM_063269623.1 → XP_063125693.1  solute carrier family 25 member 35 isoform X3

      UniProtKB/TrEMBL
      A6HFM2

    5. XM_008767852.4 → XP_008766074.1  solute carrier family 25 member 35 isoform X2

      UniProtKB/TrEMBL
      A0A8I6AH66
      Related
      ENSRNOP00000093258.1, ENSRNOT00000118323.2
      Conserved Domains (1) summary
      pfam00153
      Location:158 → 247
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein Strain
    Heading Accession and Version

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