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    Heatr6 HEAT repeat containing 6 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 497972, updated on 9-Dec-2024

    Summary

    Official Symbol
    Heatr6provided by RGD
    Official Full Name
    HEAT repeat containing 6provided by RGD
    Primary source
    RGD:1566204
    See related
    EnsemblRapid:ENSRNOG00000002542 AllianceGenome:RGD:1566204
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1566204
    Summary
    Orthologous to human HEATR6 (HEAT repeat containing 6). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 56.3), Adrenal (RPKM 48.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Heatr6 in Genome Data Viewer
    Location:
    10q26
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (69132532..69161334)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (68635048..68665445)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (71054344..71083229)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene anosmin 1, pseudogene 1 Neighboring gene WAP four-disulfide core domain 21 Neighboring gene HNF1 homeobox B Neighboring gene uncharacterized LOC134480708 Neighboring gene DExD-box helicase 52

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    HEAT repeat-containing protein 6
    Names
    2700008B19Rik-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079897.2NP_001073366.2  HEAT repeat-containing protein 6

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/Swiss-Prot
      A1EC95
      Related
      ENSRNOP00000105110.1, ENSRNOT00000123770.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      69132532..69161334
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010055225.1 RNA Sequence

    2. XR_005489915.2 RNA Sequence