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    LOC100131532 uncharacterized LOC100131532 [ Homo sapiens (human) ]

    Gene ID: 100131532, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100131532
    Gene description
    uncharacterized LOC100131532
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC100131532 in Genome Data Viewer
    Location:
    6q27
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (169962623..169967678)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (171318581..171323666)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 227-like Neighboring gene uncharacterized LOC107986674 Neighboring gene uncharacterized LOC107986675 Neighboring gene uncharacterized LOC105378150 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170344536-170345041 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170352442-170353175 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170368382-170368882 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170388707-170389258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170389259-170389810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170391695-170392194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170406887-170407388 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170432455-170433090 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:170440627-170441826 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170443766-170444266 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170444267-170444767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170462430-170463234 Neighboring gene proline-rich receptor-like protein kinase PERK10 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17801

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027434.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC174153, AC245749

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      169962623..169967678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      171318581..171323666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)