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    PINCR p53-induced noncoding RNA [ Homo sapiens (human) ]

    Gene ID: 101927501, updated on 17-Sep-2024

    Summary

    Official Symbol
    PINCRprovided by HGNC
    Official Full Name
    p53-induced noncoding RNAprovided by HGNC
    Primary source
    HGNC:HGNC:53590
    See related
    Ensembl:ENSG00000224294 AllianceGenome:HGNC:53590
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See PINCR in Genome Data Viewer
    Location:
    Xp11.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (43176994..43226598)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (42583214..42632828)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (43036243..43085847)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373188 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:42780737-42781675 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20781 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:42807743-42808658 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:42835354-42836553 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:42866214-42867063 Neighboring gene SMIM15 pseudogene 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:43035494-43036693 Neighboring gene NANOG hESC enhancer GRCh37_chrX:43098410-43098977 Neighboring gene inosine monophosphate dehydrogenase 1 pseudogene 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:43201432-43202228 Neighboring gene Nanog homeobox pseudogene 10

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110387.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL022158
      Related
      ENST00000440955.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      43176994..43226598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      42583214..42632828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)